Miyakogusa Predicted Gene

Lj3g3v0797540.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1M0I1_SOYBN 687 69.3 83.8 (tr|I1M0I1) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G13750.1 538 54.8 71.9 | Symbols: ZIFL1 | zinc induced facilitator-like 1 | chr5:4438318-4441289 FORWARD LENGTH=478

Medicago Medtr3g010820.1 741 73.7 86.8 | zinc induced facilitator-like protein | HC | chr3:2605108-2611777 | 20130731

Soybean Glyma13g25620.1 687 69.3 83.8

LJGI gnl|LJGI|FS320214 1400 99.4 99.4 similar to UniRef100_A7PTF4 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (35%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v0797540.1 length: 494 aa.

IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG

method AccNumber shortName E-value location

Molecular Function GO:0005215 transporter activity

Cellular Component GO:0005886 plasma membrane

FPrintScan PR01035 TCRTETA 1.4e-05 113-137
170-192
344-364

IPR011701 Major facilitator superfamily

Cellular Component GO:0016021 integral to membrane

Biological Process GO:0055085 transmembrane transport

HMMPfam PF07690 MFS_1 4e-31 44-390

IPR016196 Major facilitator superfamily domain, general substrate transporter

superfamily SSF103473 MFS 3.2e-49 31-482

IPR020846 Major facilitator superfamily domain

ProfileScan PS50850 MFS 21.969 40-479

no_ID

Gene3D G3DSA:1.20.1250.20 no description 4.4e-05 34-249
301-479

HMMPanther PTHR24003 MAJOR 9e-95 18-480

HMMPanther PTHR24003:SF69 SUBFAMILY 9e-95 18-480

Seg seg seg NA 112-122

Wolf-PSORT

Lj3g3v0797540.1 plas 8, nucl 1, cyto 1, mito 1, vacu 1, E.R. 1, golg 1, cyto_nucl 1, E.R._vacu 1, cyto_E.R. 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v0797540.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1M0I1_SOYBN	687	69.3	83.8	(tr\|I1M0I1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G13750.1	538	54.8	71.9	\| Symbols: ZIFL1 \| zinc induced facilitator-like 1 \| chr5:4438318-4441289 FORWARD LENGTH=478
Medicago	Medtr3g010820.1	741	73.7	86.8	\| zinc induced facilitator-like protein \| HC \| chr3:2605108-2611777 \| 20130731
Soybean	Glyma13g25620.1	687	69.3	83.8
LJGI	gnl\|LJGI\|FS320214	1400	99.4	99.4	similar to UniRef100_A7PTF4 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (35%)

IPR001958	Tetracycline resistance protein, TetA/multidrug resistance protein MdtG
Lj3g3v0797540.1				length: 494 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0005215	transporter activity
Cellular Component	GO:0005886	plasma membrane
FPrintScan	PR01035	TCRTETA	1.4e-05	113-137 170-192 344-364
IPR011701	Major facilitator superfamily
Cellular Component	GO:0016021	integral to membrane
Biological Process	GO:0055085	transmembrane transport
HMMPfam	PF07690	MFS_1	4e-31	44-390
IPR016196	Major facilitator superfamily domain, general substrate transporter
superfamily	SSF103473	MFS	3.2e-49	31-482
IPR020846	Major facilitator superfamily domain
ProfileScan	PS50850	MFS	21.969	40-479
no_ID
Gene3D	G3DSA:1.20.1250.20	no description	4.4e-05	34-249 301-479
HMMPanther	PTHR24003	MAJOR	9e-95	18-480
HMMPanther	PTHR24003:SF69	SUBFAMILY	9e-95	18-480
Seg	seg	seg	NA	112-122