Miyakogusa Predicted Gene
- Lj3g3v0797530.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IVG6_MEDTR |
135 |
73.8 |
84.5 |
(tr|G7IVG6) Protein argonaute 4A OS=Medicago truncatula GN=MTR_3g010650 PE=4 SV=1 |
| TAIR_pep |
AT2G27040.2 |
108 |
58.1 |
77.9 |
| Symbols: AGO4 | Argonaute family protein | chr2:11536795-11541503 REVERSE LENGTH=924 |
| Medicago |
Medtr3g010650.1 |
135 |
73.8 |
84.5 |
| eukaryotic translation initiation factor 2c, putative | LC | chr3:2517864-2524038 | 20130731 |
| Soybean |
Glyma06g47230.1 |
120 |
64.0 |
75.3 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0797530.1 |
length: 95 aa. |
| IPR003100 |
Argonaute/Dicer protein, PAZ |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF02170 |
PAZ |
2.9e-18 |
2-86 |
| ProfileScan |
PS50821 |
PAZ |
8.674 |
14-89 |
| superfamily |
SSF101690 |
PAZ |
1.2e-16 |
1-84 |
| no_ID |
|
| Gene3D |
G3DSA:2.170.260.10 |
no description |
1.1e-20 |
4-85 |
| HMMPanther |
PTHR22891 |
EUKARYOTIC |
4.6e-21 |
2-84 |
| HMMPanther |
PTHR22891:SF0 |
SUBFAMILY |
4.6e-21 |
2-84 |
- Wolf-PSORT
Lj3g3v0797530.1 cyto 9, nucl 3, mito 1, pero 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0797530.1 |
|