Miyakogusa Predicted Gene

Lj3g3v0766090.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L414_SOYBN 690 65.8 83.1 (tr|I1L414) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G12700.1 415 40.5 62.9 | Symbols: | ATP binding;nucleic acid binding;helicases | chr1:4323722-4326227 REVERSE LENGTH=735
Medicago Medtr0308s0020.1 706 66.7 84.0 | pentatricopeptide (PPR) repeat protein | LC | scaffold0308:7816-9441 | 20130731
Soybean Glyma09g30160.1 690 65.8 83.1  
LJGI gnl|LJGI|FS342564 1072 98.6 98.6 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14 scaffold_54, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_54, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0766090.3 length: 499 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF12854 PPR_1 1.9e-07 110-140
HMMPfam PF13041 PPR_2 2e-13 43-91
148-196
222-266
296-337
359-407
429-475
HMMTigr TIGR00756 PPR: 0.0023 46-80
81-114
116-142
151-185
187-219
221-255
256-281
292-325
326-359
361-395
396-429
432-465
466-496
ProfileScan PS51375 PPR 10.019 9-43
44-78
79-113
114-148
149-183
184-218
219-253
254-288
289-323
324-358
359-393
394-428
429-463
464-498
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 8.3e-07 186-386
no_ID  
HMMPanther PTHR24015 FAMILY 1.7e-176 1-496
HMMPanther PTHR24015:SF0 SUBFAMILY 1.7e-176 1-496
superfamily SSF48452 TPR-like 0.0012 324-422
superfamily SSF81901 HCP-like 7e-07 47-320
Wolf-PSORT
Lj3g3v0766090.3	chlo 11, nucl 1, vacu 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0766090.3