Miyakogusa Predicted Gene
- Lj3g3v0744690.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JY79_MEDTR |
634 |
61.5 |
75.7 |
(tr|G7JY79) TMV resistance protein N OS=Medicago truncatula GN=MTR_5g047480 PE=4 SV=1 |
| TAIR_pep |
AT5G36930.1 |
253 |
40.0 |
59.7 |
| Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:14567771-14571907 REVERSE LENGTH=1188 |
| Medicago |
Medtr8g011710.1 |
645 |
60.8 |
74.7 |
| disease resistance protein (TIR-NBS-LRR class) | LC | chr8:3309299-3320423 | 20130731 |
| Soybean |
Glyma16g10020.1 |
622 |
60.9 |
75.0 |
|
| LJGI |
gnl|LJGI|DC597742 |
254 |
87.9 |
87.9 |
similar to UniRef100_A2Q6C2 Cluster: TIR; n=1; Medicago truncatula|Rep: TIR - Medicago truncatula (Barrel medic), partial (16%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0744690.2 |
length: 522 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.80.10.10 |
no description |
2e-22 |
298-328 |
| HMMPanther |
PTHR11017 |
LEUCINE-RICH |
1e-49 |
1-276 |
| HMMPanther |
PTHR11017:SF130DISEASE |
RESISTANCE |
1e-49 |
1-276 |
| Seg |
seg |
seg |
NA |
130-143 |
| superfamily |
SSF52058 |
L |
1.2e-35 |
12-416 |
- Wolf-PSORT
Lj3g3v0744690.2 nucl 7, cyto 3, chlo 2, extr 1, golg 1, chlo_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0744690.2 |
|