| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7JDN8_MEDTR | 107 | 50.9 | 64.9 | (tr|G7JDN8) Global transcription factor group OS=Medicago truncatula GN=MTR_4g065620 PE=4 SV=1 |
| TAIR_pep | AT5G46550.1 | 80.9 | 38.7 | 57.3 | | Symbols: | DNA-binding bromodomain-containing protein | chr5:18884439-18886503 REVERSE LENGTH=494 |
| Medicago | Medtr3g028570.1 | 112 | 52.2 | 68.7 | | hypothetical protein | LC | chr3:9132578-9131370 | 20130731 |
| Soybean | Glyma13g36820.1 | 77.4 | 38.8 | 58.3 | |
| LJGI | --No_Hits-- |
| Lj3g3v0730070.1 | length: 274 aa. | |||
| IPR001487 | Bromodomain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.20.920.10 | no description | 1.1e-18 | 59-179 |
| HMMPfam | PF00439 | Bromodomain | 1.1e-06 | 67-144 |
| HMMSmart | SM00297 | bromo | 5.1e-08 | 56-158 |
| ProfileScan | PS50014 | BROMODOMAIN_2 | 9.325 | 97-139 |
| superfamily | SSF47370 | Bromodomain | 7.6e-21 | 33-169 |
| no_ID | ||||
| HMMPanther | PTHR22880 | FALZ-RELATED | 2.2e-19 | 97-207 |
| HMMPanther | PTHR22880:SF31 | BROMODOMAIN-CONTAINING | 2.2e-19 | 97-207 |
| Seg | seg | seg | NA | 30-45 165-182 |
Lj3g3v0730070.1 chlo 6, mito 4.5, cyto_mito 3, nucl 1, plas 1, extr 1, nucl_plas 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj3g3v0730070.1 | Not targeted | -26.770 | 0 | -11.979 | 23.99% | -14.791 |