Miyakogusa Predicted Gene

Lj3g3v0718650.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JMK1_SOYBN 1620 80.1 87.7 (tr|I1JMK1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G22860.1 1092 57.6 73.3 | Symbols: | Vacuolar sorting protein 39 | chr1:8083400-8088867 FORWARD LENGTH=961
Medicago Medtr8g012560.1 1623 81.4 87.5 | vacuolar sorting protein 39 domain protein | HC | chr8:3613259-3627710 | 20130731
Soybean Glyma03g24940.1 1557 77.8 85.0  
LJGI gnl|LJGI|TC75035 127 95.9 95.9  
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0718650.1 length: 992 aa.
IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
HMMPfam PF00637 Clathrin 1.7e-08 742-845
IPR001180 Citron-like
Molecular Function GO:0005083 small GTPase regulator activity    
HMMPfam PF00780 CNH 9.7e-09 173-338
ProfileScan PS50219 CNH 17.022 29-353
IPR019452 Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1
HMMPfam PF10366 Vps39_1 1.1e-06 544-612
IPR019453 Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2
HMMPfam PF10367 Vps39_2 2.3e-36 858-966
no_ID  
HMMPanther PTHR12894 CNH 0 5-992
HMMPanther PTHR12894:SF4 TGF 0 5-992
Seg seg seg NA 83-106
142-152
Wolf-PSORT
Lj3g3v0718650.1	nucl 4, cyto 4, plas 4, cyto_nucl 4, nucl_plas 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0718650.1