Miyakogusa Predicted Gene

Lj3g3v0718250.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1MM91_SOYBN 911 79.4 86.2 (tr|I1MM91) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G25230.1 813 78.4 88.2 | Symbols: ROF1, ATFKBP62, FKBP62 | rotamase FKBP 1 | chr3:9188257-9191137 FORWARD LENGTH=551
Medicago Medtr8g012340.1 902 79.0 84.3 | peptidyl-prolyl cis-trans isomerase FKBP62-like protein | HC | chr8:3497984-3493093 | 20130731
Soybean Glyma03g21690.1 919 78.5 85.2  
LJGI gnl|LJGI|TC60711 1447 99.9 99.9 similar to UniRef100_A7R4L2 Cluster: Chromosome undetermined scaffold_734, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_734, whole genome shotgun sequence - Vitis vinifera (Grape), partial (50%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0718250.1 length: 573 aa.
IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain
method AccNumber shortName E-value location
Biological Process GO:0006457 protein folding    
HMMPfam PF00254 FKBP_C 5.6e-20 52-142
168-259
286-380
ProfileScan PS50059 FKBP_PPIASE 21.925 57-145
173-262
290-383
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.7e-30 405-552
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 15.054 407-516
IPR013105 Tetratricopeptide TPR2
HMMPfam PF07719 TPR_2 0.025 406-429
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 1.8e-06 400-433
449-482
483-516
ProfileScan PS50005 TPR 10.502 400-433
449-482
483-516
IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type
HMMPanther PTHR10516 PEPTIDYL-PROLYL 0 1-571
no_ID  
Coil coil coiled-coil NA 516-537
Gene3D G3DSA:3.10.50.40 no description 7.9e-38 31-147
148-261
263-404
HMMPanther PTHR10516:SF66 PEPTIDYL-PROLYL 0 1-571
HMMPfam PF13414 TPR_11 7.8e-12 456-514
Seg seg seg NA 9-24
32-50
262-276
395-407
superfamily SSF48452 TPR-like 1.3e-30 387-553
superfamily SSF54534 FKBP-like 2.4e-26 25-149
270-404
151-262
Wolf-PSORT
Lj3g3v0718250.1	cyto 5, nucl 3, cyto_plas 3, chlo 2, cysk_nucl 2, nucl_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0718250.1