Miyakogusa Predicted Gene
- Lj3g3v0708080.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JZD5_MEDTR |
860 |
83.2 |
92.2 |
(tr|G7JZD5) Peptide transporter PTR OS=Medicago truncatula GN=MTR_5g055000 PE=4 SV=1 |
| TAIR_pep |
AT1G68570.1 |
759 |
75.5 |
86.1 |
| Symbols: | Major facilitator superfamily protein | chr1:25746811-25750110 FORWARD LENGTH=596 |
| Medicago |
Medtr5g055000.1 |
860 |
83.2 |
92.2 |
| peptide/nitrate transporter | HC | chr5:22654985-22661493 | 20130731 |
| Soybean |
Glyma01g20700.1 |
859 |
84.4 |
92.8 |
|
| LJGI |
gnl|LJGI|TC58457 |
1425 |
98.4 |
98.4 |
similar to UniRef100_A7P371 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0708080.1 |
length: 487 aa. |
| IPR000109 |
Proton-dependent oligopeptide transporter family |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005215 |
transporter activity |
|
|
| Biological Process |
GO:0006810 |
transport |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPanther |
PTHR11654 |
OLIGOPEPTIDE |
0 |
2-487 |
| HMMPfam |
PF00854 |
PTR2 |
1.3e-89 |
85-487 |
| IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
| superfamily |
SSF103473 |
MFS |
5.6e-16 |
1-487 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.1250.20 |
no description |
2.3e-09 |
29-225 |
| HMMPanther |
PTHR11654:SF57 |
SUBFAMILY |
0 |
2-487 |
- Wolf-PSORT
Lj3g3v0708080.1 plas 8, cyto 4, nucl_plas 4, golg_plas 4, cysk_plas 4, E.R._plas 4, mito_plas 4
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0708080.1 |
|