Miyakogusa Predicted Gene
- Lj3g3v0697000.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
G7ITJ8_MEDTR |
677 |
64.7 |
80.1 |
(tr|G7ITJ8) Serine/threonine-protein kinase OS=Medicago truncatula GN=MTR_2g081470 PE=3 SV=1 |
TAIR_pep |
AT4G27290.1 |
385 |
43.6 |
62.7 |
| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783 |
Medicago |
Medtr2g081470.1 |
677 |
64.7 |
80.1 |
| S-locus lectin kinase family protein | HC | chr2:34195488-34191659 | 20130731 |
Soybean |
Glyma04g28420.1 |
490 |
54.0 |
70.3 |
|
LJGI |
gnl|LJGI|AV778124 |
367 |
93.0 |
93.0 |
weakly similar to UniRef100_Q70I30 Cluster: S-receptor kinase-like protein 1; n=1; Lotus japonicus|Rep: S-receptor kinase-like protein 1 - Lotus japonicus, partial (8%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0697000.3 |
length: 480 aa. |
IPR000858 |
S-locus glycoprotein |
method |
AccNumber |
shortName |
E-value |
location |
Biological Process |
GO:0048544 |
recognition of pollen |
|
|
HMMPfam |
PF00954 |
S_locus_glycop |
8e-30 |
206-315 |
IPR001480 |
Bulb-type lectin domain |
Gene3D |
G3DSA:2.90.10.10 |
no description |
1.1e-27 |
24-153 |
HMMPfam |
PF01453 |
B_lectin |
2.5e-30 |
69-179 |
HMMSmart |
SM00108 |
Bulb-type |
1.6e-38 |
29-148 |
ProfileScan |
PS50927 |
BULB_LECTIN |
20.177 |
23-144 |
superfamily |
SSF51110 |
alpha-D-mannose-specific |
2.7e-32 |
54-213 |
IPR003609 |
Apple-like |
HMMSmart |
SM00473 |
divergent |
4.5e-12 |
337-416 |
ProfileScan |
PS50948 |
PAN |
10.004 |
328-417 |
IPR013227 |
PAN-2 domain |
HMMPfam |
PF08276 |
PAN_2 |
1e-21 |
338-402 |
no_ID |
|
HMMPanther |
PTHR11795 |
UNCHARACTERIZED |
7e-80 |
24-420 |
HMMPanther |
PTHR11795:SF72 |
OS07G0550500 |
7e-80 |
24-420 |
Seg |
seg |
seg |
NA |
453-461 |
- Wolf-PSORT
Lj3g3v0697000.3 extr 4, E.R. 4, golg 2, cyto_E.R. 2, chlo 1, mito 1, plas 1, vacu 1, chlo_mito 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj3g3v0697000.3 |
|