Miyakogusa Predicted Gene
- Lj3g3v0669210.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SIK9_LOTJA |
308 |
84.7 |
87.5 |
(tr|I3SIK9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G54890.1 |
208 |
63.7 |
80.8 |
| Symbols: | Late embryogenesis abundant (LEA) protein-related | chr1:20463107-20464407 FORWARD LENGTH=347 |
| Medicago |
Medtr2g080260.1 |
270 |
84.7 |
91.7 |
| root cap/late embryogenesis related | HC | chr2:33879944-33878075 | 20130731 |
| Soybean |
Glyma06g38530.1 |
238 |
75.0 |
86.8 |
|
| LJGI |
gnl|LJGI|TC74339 |
690 |
92.4 |
92.4 |
similar to UniRef100_A7P1G9 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (88%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0669210.1 |
length: 176 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR31656 |
FAMILY |
7.9e-74 |
36-176 |
| HMMPanther |
PTHR31656:SF0 |
SUBFAMILY |
7.9e-74 |
36-176 |
| Seg |
seg |
seg |
NA |
9-20 |
- Wolf-PSORT
Lj3g3v0669210.1 extr 10, chlo 1, cyto 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0669210.1 |
|