Miyakogusa Predicted Gene

Lj3g3v0662800.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M2D4_SOYBN 275 67.6 75.6 (tr|K7M2D4) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1
TAIR_pep AT5G54200.1 257 62.4 74.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:21993565-21997076 REVERSE LENGTH=825
Medicago Medtr2g079740.1 311 76.6 80.5 | transducin/WD-like repeat-protein | HC | chr2:33593874-33587864 | 20130731
Soybean Glyma13g35500.1 275 67.6 75.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0662800.1 length: 254 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 4.5e-10 121-154
HMMSmart SM00320 WD40 9.4e-08 116-155
ProfileScan PS50082 WD_REPEATS_2 12.948 123-164
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 2.7e-13 228-252
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 12.077 123-164
superfamily SSF50978 WD40 1.2e-10 121-254
no_ID  
HMMPanther PTHR14221 WD 2.8e-58 1-254
HMMPanther PTHR14221:SF0 SUBFAMILY 2.8e-58 1-254
Seg seg seg NA 10-49
66-78
203-215
Wolf-PSORT
Lj3g3v0662800.1	nucl 12, cyto 1, plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0662800.1