Miyakogusa Predicted Gene
- Lj3g3v0642580.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T3W9_LOTJA |
330 |
100.0 |
100.0 |
(tr|I3T3W9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G03100.1 |
257 |
77.3 |
88.7 |
| Symbols: | NADH:ubiquinone oxidoreductase, 17.2kDa subunit | chr3:705564-707578 REVERSE LENGTH=159 |
| Medicago |
Medtr8g009960.1 |
283 |
86.3 |
94.1 |
| NADH:ubiquinone oxidoreductase 17.2 kDa subunit | HC | chr8:2489339-2485436 | 20130731 |
| Soybean |
Glyma01g43850.1 |
286 |
85.9 |
92.9 |
|
| LJGI |
gnl|LJGI|TC66653 |
936 |
99.6 |
99.6 |
similar to UniRef100_A7PBC9 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (96%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0642580.1 |
length: 159 aa. |
| IPR007763 |
NADH:ubiquinone oxidoreductase, 17.2kDa subunit |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0008137 |
NADH dehydrogenase (ubiquinone) activity |
|
|
| Molecular Function |
GO:0009055 |
electron carrier activity |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPanther |
PTHR12910 |
NADH-UBIQUINONE |
4.3e-50 |
1-159 |
| HMMPfam |
PF05071 |
NDUFA12 |
2.3e-28 |
49-153 |
| no_ID |
|
| HMMPanther |
PTHR12910:SF0 |
SUBFAMILY |
4.3e-50 |
1-159 |
- Wolf-PSORT
Lj3g3v0642580.1 cyto 5.5, cyto_E.R. 3.5, nucl 3, chlo 1, mito 1, plas 1, extr 1, cysk 1, chlo_mito 1, cysk_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0642580.1 |
|