Miyakogusa Predicted Gene
- Lj3g3v0642540.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S0C6_LOTJA |
325 |
94.6 |
94.6 |
(tr|I3S0C6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G64850.1 |
214 |
64.7 |
76.3 |
| Symbols: | Calcium-binding EF hand family protein | chr1:24096548-24097574 REVERSE LENGTH=162 |
| Medicago |
Medtr8g009870.1 |
240 |
68.7 |
81.6 |
| calcium-binding EF hand protein | HC | chr8:2446438-2450029 | 20130731 |
| Soybean |
Glyma07g12400.1 |
263 |
75.0 |
86.6 |
|
| LJGI |
gnl|LJGI|GO006071 |
1005 |
100.0 |
100.0 |
weakly similar to UniRef100_A9SSD2 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (33%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0642540.1 |
length: 167 aa. |
| IPR002048 |
EF-hand domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005509 |
calcium ion binding |
|
|
| ProfileScan |
PS50222 |
EF_HAND_2 |
12.059 |
66-101 |
| IPR011992 |
EF-hand-like domain |
| Molecular Function |
GO:0005509 |
calcium ion binding |
|
|
| Gene3D |
G3DSA:1.10.238.10 |
no description |
5.9e-06 |
25-101 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
115-123 |
- Wolf-PSORT
Lj3g3v0642540.1 plas 3, E.R. 3, E.R._plas 3, chlo 2, extr 2, nucl_plas 2, E.R._vacu 2, mito_plas 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0642540.1 |
|