Miyakogusa Predicted Gene

Lj3g3v0642450.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5W3G7_PRUPE 805 62.8 75.6 (tr|M5W3G7) Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024338mg PE=4 SV=1
TAIR_pep AT2G29760.1 489 43.4 64.0 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:12712884-12715100 FORWARD LENGTH=738
Medicago Medtr3g052720.1 478 43.9 63.9 | organelle transcript processing protein, putative | HC | chr3:20868148-20864227 | 20130731
Soybean Glyma08g22830.1 504 43.5 64.0  
LJGI gnl|LJGI|FS336830 1475 99.7 99.7 weakly similar to UniRef100_A7Q9C2 Cluster: Chromosome chr19 scaffold_66, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_66, whole genome shotgun sequence - Vitis vinifera (Grape), partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0642450.1 length: 592 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.021 127-151
257-284
426-454
HMMPfam PF13041 PPR_2 1.5e-08 184-231
285-332
HMMPfam PF13812 PPR_3 0.052 357-383
HMMTigr TIGR00756 PPR: 5.7e-08 156-185
187-220
256-284
287-320
ProfileScan PS51375 PPR 5.283 52-86
184-218
153-183
122-152
87-121
285-319
254-284
219-253
320-355
356-386
422-456
388-418
no_ID  
HMMPanther PTHR24015 FAMILY 3.7e-254 53-592
HMMPanther PTHR24015:SF61 PGR3 3.7e-254 53-592
HMMPfam PF14432 DYW_deaminase 1.2e-17 470-582
Seg seg seg NA 300-311
Wolf-PSORT
Lj3g3v0642450.1	cyto 8, chlo 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0642450.1