Miyakogusa Predicted Gene

Lj3g3v0619310.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JMH5_SOYBN 510 93.2 96.6 (tr|I1JMH5) Ribose-phosphate pyrophosphokinase OS=Glycine max PE=3 SV=1

TAIR_pep AT2G44530.1 425 79.7 86.5 | Symbols: | Phosphoribosyltransferase family protein | chr2:18383732-18385974 FORWARD LENGTH=394

Medicago Medtr8g009660.2 476 87.8 92.2 | ribose-phosphate pyrophosphokinase | HC | chr8:2343998-2336992 | 20130731

Soybean Glyma03g24280.3 510 93.2 96.6

LJGI gnl|LJGI|TC59339 1229 100.0 100.0 homologue to UniRef100_Q9XG98 Cluster: Ribose-phosphate pyrophosphokinase 1; n=1; Spinacia oleracea|Rep: Ribose-phosphate pyrophosphokinase 1 - Spinacia oleracea (Spinach), partial (47%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v0619310.1 length: 294 aa.

IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site

method AccNumber shortName E-value location

Molecular Function GO:0000287 magnesium ion binding

Molecular Function GO:0004749 ribose phosphate diphosphokinase activity

Biological Process GO:0009156 ribonucleoside monophosphate biosynthetic process

Biological Process GO:0044249 cellular biosynthetic process

PatternScan PS00114 PRPP_SYNTHASE NA 212-227

IPR005946 Ribose-phosphate diphosphokinase

Molecular Function GO:0000287 magnesium ion binding

Molecular Function GO:0004749 ribose phosphate diphosphokinase activity

Biological Process GO:0009165 nucleotide biosynthetic process

HMMTigr TIGR01251 ribP_PPkin: 3.3e-78 89-294

no_ID

Gene3D G3DSA:3.40.50.2020 no description 4.1e-12 86-243
244-294

HMMPanther PTHR10210 RIBOSE-PHOSPHATE 2e-117 81-294

HMMPfam PF13793 Pribosyltran_N 3.2e-49 88-204

Seg seg seg NA 2-28

superfamily SSF53271 PRTase-like 2.1e-10 84-244
248-294

Wolf-PSORT

Lj3g3v0619310.1 chlo 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v0619310.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JMH5_SOYBN	510	93.2	96.6	(tr\|I1JMH5) Ribose-phosphate pyrophosphokinase OS=Glycine max PE=3 SV=1
TAIR_pep	AT2G44530.1	425	79.7	86.5	\| Symbols: \| Phosphoribosyltransferase family protein \| chr2:18383732-18385974 FORWARD LENGTH=394
Medicago	Medtr8g009660.2	476	87.8	92.2	\| ribose-phosphate pyrophosphokinase \| HC \| chr8:2343998-2336992 \| 20130731
Soybean	Glyma03g24280.3	510	93.2	96.6
LJGI	gnl\|LJGI\|TC59339	1229	100.0	100.0	homologue to UniRef100_Q9XG98 Cluster: Ribose-phosphate pyrophosphokinase 1; n=1; Spinacia oleracea\|Rep: Ribose-phosphate pyrophosphokinase 1 - Spinacia oleracea (Spinach), partial (47%)

IPR000842	Phosphoribosyl pyrophosphate synthetase, conserved site
Lj3g3v0619310.1				length: 294 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0000287	magnesium ion binding
Molecular Function	GO:0004749	ribose phosphate diphosphokinase activity
Biological Process	GO:0009156	ribonucleoside monophosphate biosynthetic process
Biological Process	GO:0044249	cellular biosynthetic process
PatternScan	PS00114	PRPP_SYNTHASE	NA	212-227
IPR005946	Ribose-phosphate diphosphokinase
Molecular Function	GO:0000287	magnesium ion binding
Molecular Function	GO:0004749	ribose phosphate diphosphokinase activity
Biological Process	GO:0009165	nucleotide biosynthetic process
HMMTigr	TIGR01251	ribP_PPkin:	3.3e-78	89-294
no_ID
Gene3D	G3DSA:3.40.50.2020	no description	4.1e-12	86-243 244-294
HMMPanther	PTHR10210	RIBOSE-PHOSPHATE	2e-117	81-294
HMMPfam	PF13793	Pribosyltran_N	3.2e-49	88-204
Seg	seg	seg	NA	2-28
superfamily	SSF53271	PRTase-like	2.1e-10	84-244 248-294