Miyakogusa Predicted Gene

Lj3g3v0599570.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M0RX44_MUSAM 180 75.2 84.3 (tr|M0RX44) Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1
TAIR_pep AT3G60245.1 166 92.9 96.5 | Symbols: | Zinc-binding ribosomal protein family protein | chr3:22268803-22269750 FORWARD LENGTH=92
Medicago Medtr0199s0040.1 185 92.8 94.8 | 60S ribosomal protein L37a-2 | LC | scaffold0199:12346-16101 | 20130731
Soybean Glyma17g15970.1 175 100.0 100.0  
LJGI gnl|LJGI|TC68678 607 100.0 100.0 homologue to UniRef100_Q9ZRS8 Cluster: 60S ribosomal protein L37a; n=2; Pinaceae|Rep: 60S ribosomal protein L37a - Pseudotsuga menziesii (Douglas-fir), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0599570.1 length: 132 aa.
IPR002674 Ribosomal protein L37ae
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HAMAP MF_00327 Ribosomal_L37Ae 19.008 51-119
HMMPfam PF01780 Ribosomal_L37ae 2.4e-35 49-132
HMMTigr TIGR00280 L37a: 1e-30 48-132
IPR011331 Ribosomal protein L37ae/L37e
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
Gene3D G3DSA:2.20.25.30 no description 5.7e-38 57-132
IPR011332 Ribosomal protein, zinc-binding domain
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
superfamily SSF57829 Zn-binding 1.3e-30 57-129
no_ID  
HMMPanther PTHR11517 60S 2.1e-59 49-132
Wolf-PSORT
Lj3g3v0599570.1	chlo 7, nucl 3, mito 2, cyto_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0599570.1