Miyakogusa Predicted Gene

Lj3g3v0596290.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1JMN3_SOYBN 612 74.6 86.4 (tr|I1JMN3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G02150.1 516 62.2 80.3 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:408779-410433 FORWARD LENGTH=524
Medicago Medtr8g007375.1 595 74.2 87.1 | PPR containing plant-like protein | HC | chr8:1491114-1492337 | 20130731
Soybean Glyma03g25670.1 612 74.6 86.4  
LJGI gnl|LJGI|TC68863 2208 97.8 97.8 weakly similar to UniRef100_A7PK81 Cluster: Chromosome chr15 scaffold_19, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_19, whole genome shotgun sequence - Vitis vinifera (Grape), partial (87%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0596290.1 length: 407 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 0.015 159-180
IPR002885 Pentatricopeptide repeat
HMMPfam PF01535 PPR 0.0046 54-82
90-118
264-290
HMMTigr TIGR00756 PPR: 7.4e-05 90-121
264-294
ProfileScan PS51375 PPR 5.985 51-85
86-120
154-184
259-293
224-258
294-329
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.5e-09 131-325
no_ID  
HMMPanther PTHR24015 FAMILY 8.4e-175 2-375
HMMPanther PTHR24015:SF160LIPOYLTRANSFERASE, PUTATIVE 8.4e-175 2-375
Seg seg seg NA 391-403
superfamily SSF48452 TPR-like 2.3e-06 159-320
Wolf-PSORT
Lj3g3v0596290.1	nucl 7, cyto 5, mito 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0596290.1