Miyakogusa Predicted Gene

Lj3g3v0582180.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LGS1_SOYBN 488 74.8 78.5 (tr|I1LGS1) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT4G17380.1 402 63.5 72.6 | Symbols: MSH4, ATMSH4 | MUTS-like protein 4 | chr4:9708742-9714068 FORWARD LENGTH=792
Medicago Medtr5g012900.1 476 76.8 81.3 | DNA mismatch repair MSH4-like protein, putative | HC | chr5:3982230-3989626 | 20130731
Soybean Glyma11g03750.1 489 74.8 78.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0582180.1 length: 397 aa.
IPR007696 DNA mismatch repair protein MutS, core
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006298 mismatch repair    
Molecular Function GO:0030983 mismatched DNA binding    
HMMPfam PF05192 MutS_III 5.5e-17 8-275
HMMSmart SM00533 DNA-binding 5.3e-05 2-333
superfamily SSF48334 DNA 2.5e-29 8-286
IPR007861 DNA mismatch repair protein MutS, clamp
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006298 mismatch repair    
Molecular Function GO:0030983 mismatched DNA binding    
HMMPfam PF05190 MutS_IV 3.7e-08 163-243
no_ID  
Gene3D G3DSA:1.10.1420.10 no description 7e-23 8-202
HMMPanther PTHR11361 DNA 3.1e-154 8-296
HMMPanther PTHR11361:SF36 MUTS 3.1e-154 8-296
Seg seg seg NA 5-16
92-103
261-271
Wolf-PSORT
Lj3g3v0582180.1	chlo 5, nucl 2.5, mito 2, cysk_nucl 2, cyto 1, plas 1, vacu 1, E.R. 1, cyto_mito 1, E.R._vacu 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0582180.1