Miyakogusa Predicted Gene

Lj3g3v0549570.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KYN5_SOYBN 970 73.7 82.5 (tr|K7KYN5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G24000.1 688 56.5 71.5 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:8672774-8674881 FORWARD LENGTH=665
Medicago Medtr1g007610.1 934 70.7 80.5 | pentatricopeptide (PPR) repeat protein | HC | chr1:453448-455881 | 20130731
Soybean Glyma06g48080.1 908 77.1 85.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0549570.1 length: 655 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.08 116-141
219-241
323-347
492-517
HMMPfam PF13041 PPR_2 8.1e-12 141-190
245-291
349-396
HMMTigr TIGR00756 PPR: 4.4e-05 114-141
248-280
323-349
351-384
386-418
ProfileScan PS51375 PPR 7.476 142-176
111-141
74-108
246-282
214-244
283-317
349-383
318-348
384-418
419-453
485-519
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.1e-06 324-506
no_ID  
HMMPanther PTHR24015 FAMILY 1.2e-277 60-655
HMMPanther PTHR24015:SF128SUBFAMILY NOT 1.2e-277 60-655
HMMPfam PF14432 DYW_deaminase 2.4e-14 523-644
Seg seg seg NA 255-270
Wolf-PSORT
Lj3g3v0549570.1	mito 9.5, cyto_mito 5.5, chlo 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0549570.1