Miyakogusa Predicted Gene
- Lj3g3v0526190.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7L183_SOYBN |
532 |
62.6 |
79.0 |
(tr|K7L183) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G76520.2 |
372 |
43.6 |
68.4 |
| Symbols: | Auxin efflux carrier family protein | chr1:28715384-28717289 FORWARD LENGTH=390 |
| Medicago |
Medtr8g006775.1 |
535 |
63.6 |
78.6 |
| auxin efflux carrier family protein | HC | chr8:940896-947475 | 20130731 |
| Soybean |
Glyma07g14130.1 |
504 |
60.5 |
75.7 |
|
| LJGI |
gnl|LJGI|TC73844 |
1544 |
100.0 |
100.0 |
weakly similar to UniRef100_A7QSR6 Cluster: Chromosome chr4 scaffold_162, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_162, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0526190.1 |
length: 413 aa. |
| IPR004776 |
Auxin efflux carrier |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| Biological Process |
GO:0055085 |
transmembrane transport |
|
|
| HMMPfam |
PF03547 |
Mem_trans |
2.9e-56 |
10-404 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
206-227 |
| HMMPanther |
PTHR31651 |
FAMILY |
4.1e-138 |
2-413 |
- Wolf-PSORT
Lj3g3v0526190.1 vacu 5, plas 4, E.R. 2, golg 2, nucl_plas 2, cysk_plas 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0526190.1 |
|