Miyakogusa Predicted Gene

Lj3g3v0489500.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M0Y0_SOYBN 636 69.5 73.2 (tr|I1M0Y0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G41900.1 329 67.2 72.7 | Symbols: | CCCH-type zinc finger protein with ARM repeat domain | chr2:17491352-17493502 FORWARD LENGTH=716
Medicago Medtr3g029590.1 555 63.2 69.0 | ARM repeat CCCH-type zinc finger protein | HC | chr3:9317344-9312889 | 20130731
Soybean Glyma13g27280.1 636 69.5 73.2  
LJGI gnl|LJGI|TC58284 478 100.0 100.0 similar to UniRef100_A7Q2A5 Cluster: Chromosome chr13 scaffold_45, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_45, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0489500.2 length: 469 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1000.10 no description 0.00075 207-237
HMMPfam PF00642 zf-CCCH 5.2e-05 178-199
HMMSmart SM00356 zinc 35 174-200
209-232
ProfileScan PS50103 ZF_C3H1 13.582 179-201
no_ID  
HMMPanther PTHR14493 UNCHARACTERIZED 3.9e-179 9-465
HMMPanther PTHR14493:SF18 PEI1, 3.9e-179 9-465
Seg seg seg NA 55-77
244-281
286-300
318-326
superfamily SSF90229 CCCH 0.0068 169-202
204-239
Wolf-PSORT
Lj3g3v0489500.2	nucl 10, cyto 2, cysk 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0489500.2