Miyakogusa Predicted Gene

Lj3g3v0478170.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KTL3_SOYBN 829 62.7 73.2 (tr|I1KTL3) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G12640.1 379 39.4 51.8 | Symbols: | RNA binding (RRM/RBD/RNP motifs) family protein | chr3:4014455-4017675 FORWARD LENGTH=638
Medicago Medtr3g028140.1 805 62.4 72.3 | RNA-binding (RRM/RBD/RNP motif) family protein | HC | chr3:8902502-8910404 | 20130731
Soybean Glyma08g16260.1 737 58.2 69.1  
LJGI gnl|LJGI|TC61524 1118 99.8 99.8 similar to UniRef100_A7QWV2 Cluster: Chromosome chr13 scaffold_210, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_210, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0478170.1 length: 689 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 2.3e-15 517-585
HMMSmart SM00360 RNA 6.7e-19 516-588
ProfileScan PS50102 RRM 16.227 515-592
IPR002483 PWI domain
Biological Process GO:0006397 mRNA processing    
HMMPfam PF01480 PWI 1.1e-07 23-84
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 4.9e-21 513-589
no_ID  
HMMPanther PTHR23365 POLY-A 4.2e-48 176-614
Seg seg seg NA 238-256
653-667
superfamily SSF54928 RNA-binding 2.1e-21 498-612
Wolf-PSORT
Lj3g3v0478170.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0478170.1