Miyakogusa Predicted Gene

Lj3g3v0465910.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7LWN5_SOYBN 443 55.2 70.2 (tr|K7LWN5) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G36930.2 199 34.1 53.8 | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:14567771-14571916 REVERSE LENGTH=1191

Medicago Medtr4g023260.1 439 55.3 70.6 | disease resistance protein (TIR-NBS-LRR class), putative | LC | chr4:7840233-7834686 | 20130731

Soybean Glyma12g36840.1 433 55.1 70.2

LJGI gnl|LJGI|TC58686 1417 100.0 100.0 weakly similar to UniRef100_Q8W2C0 Cluster: Functional candidate resistance protein KR1; n=1; Glycine max|Rep: Functional candidate resistance protein KR1 - Glycine max (Soybean), partial (7%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v0465910.1 length: 426 aa.

IPR000157 Toll/interleukin-1 receptor homology (TIR) domain

method AccNumber shortName E-value location

Molecular Function GO:0005515 protein binding

Biological Process GO:0007165 signal transduction

HMMPfam PF01582 TIR 7.1e-15 19-142

HMMSmart SM00255 Toll 0.00013 13-147

ProfileScan PS50104 TIR 12.608 55-147

superfamily SSF52200 Toll/Interleukin 7.3e-20 2-150

IPR000767 Disease resistance protein

Biological Process GO:0006952 defense response

FPrintScan PR00364 DISEASERSIST 1.1e-16 209-224
289-303
383-397

IPR002182 NB-ARC

Molecular Function GO:0043531 ADP binding

HMMPfam PF00931 NB-ARC 5.3e-40 193-414

IPR027417 P-loop containing nucleoside triphosphate hydrolase

superfamily SSF52540 P-loop 9.1e-27 167-414

no_ID

Gene3D G3DSA:3.40.50.10140 no description 8.4e-07 10-120

Gene3D G3DSA:3.40.50.300 no description 7.8e-11 202-345

HMMPanther PTHR11017 LEUCINE-RICH 6.5e-85 59-417

HMMPanther PTHR11017:SF130DISEASE RESISTANCE 6.5e-85 59-417

Seg seg seg NA 295-305

Wolf-PSORT

Lj3g3v0465910.1 nucl 6, cyto 5, chlo 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v0465910.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7LWN5_SOYBN	443	55.2	70.2	(tr\|K7LWN5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G36930.2	199	34.1	53.8	\| Symbols: \| Disease resistance protein (TIR-NBS-LRR class) family \| chr5:14567771-14571916 REVERSE LENGTH=1191
Medicago	Medtr4g023260.1	439	55.3	70.6	\| disease resistance protein (TIR-NBS-LRR class), putative \| LC \| chr4:7840233-7834686 \| 20130731
Soybean	Glyma12g36840.1	433	55.1	70.2
LJGI	gnl\|LJGI\|TC58686	1417	100.0	100.0	weakly similar to UniRef100_Q8W2C0 Cluster: Functional candidate resistance protein KR1; n=1; Glycine max\|Rep: Functional candidate resistance protein KR1 - Glycine max (Soybean), partial (7%)

IPR000157	Toll/interleukin-1 receptor homology (TIR) domain
Lj3g3v0465910.1				length: 426 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0005515	protein binding
Biological Process	GO:0007165	signal transduction
HMMPfam	PF01582	TIR	7.1e-15	19-142
HMMSmart	SM00255	Toll	0.00013	13-147
ProfileScan	PS50104	TIR	12.608	55-147
superfamily	SSF52200	Toll/Interleukin	7.3e-20	2-150
IPR000767	Disease resistance protein
Biological Process	GO:0006952	defense response
FPrintScan	PR00364	DISEASERSIST	1.1e-16	209-224 289-303 383-397
IPR002182	NB-ARC
Molecular Function	GO:0043531	ADP binding
HMMPfam	PF00931	NB-ARC	5.3e-40	193-414
IPR027417	P-loop containing nucleoside triphosphate hydrolase
superfamily	SSF52540	P-loop	9.1e-27	167-414
no_ID
Gene3D	G3DSA:3.40.50.10140	no description	8.4e-07	10-120
Gene3D	G3DSA:3.40.50.300	no description	7.8e-11	202-345
HMMPanther	PTHR11017	LEUCINE-RICH	6.5e-85	59-417
HMMPanther	PTHR11017:SF130DISEASE	RESISTANCE	6.5e-85	59-417
Seg	seg	seg	NA	295-305