Miyakogusa Predicted Gene

Lj3g3v0463690.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL A9PG66_POPTR 149 41.7 53.1 (tr|A9PG66) Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1
TAIR_pep AT5G06710.1 109 75.8 89.4 | Symbols: HAT14 | homeobox from Arabidopsis thaliana | chr5:2068305-2070284 REVERSE LENGTH=336
Medicago Medtr2g061030.1 110 73.3 85.3 | homeobox associated leucine zipper protein | HC | chr2:25903142-25901207 | 20130731
Soybean Glyma02g28860.1 119 38.6 47.9  
LJGI gnl|LJGI|TC72963 77.8 97.7 97.7 homologue to UniRef100_Q39862 Cluster: Homeobox-leucine zipper protein; n=1; Glycine max|Rep: Homeobox-leucine zipper protein - Glycine max (Soybean), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0463690.1 length: 234 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 1.9e-15 178-232
HMMSmart SM00389 Homeodomain 2.3e-10 176-234
ProfileScan PS50071 HOMEOBOX_2 16.876 174-234
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 2.8e-16 163-228
superfamily SSF46689 Homeodomain-like 1.3e-16 163-232
no_ID  
HMMPanther PTHR24326 FAMILY 4e-25 136-234
HMMPanther PTHR24326:SF63 SUBFAMILY 4e-25 136-234
Seg seg seg NA 7-18
144-153
Wolf-PSORT
Lj3g3v0463690.1	chlo 9, nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0463690.1