Miyakogusa Predicted Gene
- Lj3g3v0462300.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SR00_MEDTR |
825 |
76.9 |
84.8 |
(tr|I3SR00) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1 |
| TAIR_pep |
AT1G22882.1 |
427 |
45.8 |
64.9 |
| Symbols: | Galactose-binding protein | chr1:8099150-8101220 FORWARD LENGTH=660 |
| Medicago |
Medtr1g069420.1 |
814 |
76.6 |
84.4 |
| Sad1/UNC-like carboxy-terminal protein | LC | chr1:30032795-30025776 | 20130731 |
| Soybean |
Glyma12g37090.1 |
743 |
66.7 |
74.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0462300.1 |
length: 588 aa. |
| IPR008979 |
Galactose-binding domain-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:2.60.120.260 |
no description |
1e-08 |
199-328 |
| superfamily |
SSF49785 |
Galactose-binding |
9e-11 |
204-329 |
| IPR012919 |
Sad1/UNC-like, C-terminal |
| HMMPfam |
PF07738 |
Sad1_UNC |
7e-37 |
206-328 |
| ProfileScan |
PS51469 |
SUN |
37.094 |
166-330 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
497-525 |
| HMMPanther |
PTHR12953 |
MEMBRANE |
1.5e-100 |
141-469 |
| Seg |
seg |
seg |
NA |
23-37 |
- Wolf-PSORT
Lj3g3v0462300.1 plas 12, vacu 1, E.R. 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0462300.1 |
|