Miyakogusa Predicted Gene

Lj3g3v0461740.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1J411_SOYBN 1225 74.1 83.5 (tr|I1J411) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G49170.1 903 54.9 72.8 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:18226954-18229600 REVERSE LENGTH=850
Medicago Medtr4g031160.1 1183 72.1 82.0 | pentatricopeptide (PPR) repeat protein | HC | chr4:10600555-10597860 | 20130731
Soybean Glyma0048s00240.1 1206 74.8 84.3  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0461740.1 length: 840 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.082 97-121
126-156
407-432
608-631
HMMPfam PF13041 PPR_2 2.3e-13 227-274
331-379
533-580
HMMTigr TIGR00756 PPR: 9.2e-09 126-160
229-262
407-433
507-533
535-568
ProfileScan PS51375 PPR 5.064 92-122
57-91
124-158
227-261
195-226
159-193
262-296
331-366
367-401
402-436
533-567
502-532
467-501
568-603
604-634
670-704
636-666
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.7e-05 633-690
no_ID  
HMMPanther PTHR24015 FAMILY 0 64-840
HMMPanther PTHR24015:SF62 SUBFAMILY 0 64-840
HMMPfam PF14432 DYW_deaminase 5.3e-20 716-830
Seg seg seg NA 2-15
18-41
84-104
Wolf-PSORT
Lj3g3v0461740.1	chlo 12, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0461740.1