Miyakogusa Predicted Gene

Lj3g3v0461620.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M864_SOYBN 799 80.9 86.1 (tr|K7M864) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G02660.1 670 69.7 80.9 | Symbols: emb2768 | Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial | chr3:570221-571756 REVERSE LENGTH=511
Medicago Medtr3g466250.1 834 82.7 87.6 | tyrosyl-tRNA synthetase | HC | chr3:27231447-27233269 | 20130731
Soybean Glyma02g40060.1 751 79.2 83.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0461620.1 length: 500 aa.
IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
PatternScan PS00178 AA_TRNA_LIGASE_I NA 94-104
IPR002305 Aminoacyl-tRNA synthetase, class Ic
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPfam PF00579 tRNA-synt_1b 1.4e-74 83-399
IPR002307 Tyrosine-tRNA ligase
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004831 tyrosine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006437 tyrosyl-tRNA aminoacylation    
FPrintScan PR01040 TRNASYNTHTYR 9.1e-27 98-120
237-252
258-280
293-305
HMMTigr TIGR00234 tyrS: 1.6e-106 63-498
IPR002942 RNA-binding S4 domain
Molecular Function GO:0003723 RNA binding    
Gene3D G3DSA:3.10.290.10 no description 6.6e-26 395-499
HMMPfam PF01479 S4 1.6e-06 438-480
HMMSmart SM00363 S4 0.0041 434-491
ProfileScan PS50889 S4 12.599 433-499
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
Gene3D G3DSA:3.40.50.620 no description 7.4e-92 46-309
IPR024088 Tyrosine-tRNA ligase, bacterial-type
Molecular Function GO:0004831 tyrosine-tRNA ligase activity    
HMMPanther PTHR11766 TYROSYL-TRNA 1.4e-179 57-500
IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1
Molecular Function GO:0004831 tyrosine-tRNA ligase activity    
HAMAP MF_02006 Tyr_tRNA_synth_type1 39.875 57-499
no_ID  
Gene3D G3DSA:1.10.240.10 no description 2.6e-34 310-394
HMMPanther PTHR11766:SF0 SUBFAMILY 1.4e-179 57-500
Seg seg seg NA 44-54
178-184
superfamily SSF52374 Nucleotidylyl 3.1e-89 56-400
superfamily SSF55174 Alpha-L 1.7e-18 399-500
Wolf-PSORT
Lj3g3v0461620.1	chlo 10, mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0461620.1 Not targeted -56.305 -0.061 -6.886 84.32% -49.358