| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7M864_SOYBN | 523 | 92.5 | 95.3 | (tr|K7M864) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep | AT3G02660.1 | 462 | 77.8 | 90.0 | | Symbols: emb2768 | Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial | chr3:570221-571756 REVERSE LENGTH=511 |
| Medicago | Medtr3g466250.1 | 538 | 93.9 | 97.5 | | tyrosyl-tRNA synthetase | HC | chr3:27231447-27233269 | 20130731 |
| Soybean | Glyma02g40060.1 | 514 | 91.4 | 94.2 | |
| LJGI | --No_Hits-- |
| Lj3g3v0461420.1 | length: 279 aa. | |||
| IPR002305 | Aminoacyl-tRNA synthetase, class Ic | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Molecular Function | GO:0004812 | aminoacyl-tRNA ligase activity | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| Cellular Component | GO:0005737 | cytoplasm | ||
| Biological Process | GO:0006418 | tRNA aminoacylation for protein translation | ||
| HMMPfam | PF00579 | tRNA-synt_1b | 1.5e-46 | 1-178 |
| IPR002307 | Tyrosine-tRNA ligase | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Molecular Function | GO:0004831 | tyrosine-tRNA ligase activity | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| Cellular Component | GO:0005737 | cytoplasm | ||
| Biological Process | GO:0006437 | tyrosyl-tRNA aminoacylation | ||
| FPrintScan | PR01040 | TRNASYNTHTYR | 2.3e-20 | 16-31 37-59 72-84 |
| HMMTigr | TIGR00234 | tyrS: | 5.6e-68 | 1-277 |
| IPR002942 | RNA-binding S4 domain | |||
| Molecular Function | GO:0003723 | RNA binding | ||
| Gene3D | G3DSA:3.10.290.10 | no description | 2e-26 | 174-278 |
| HMMPfam | PF01479 | S4 | 7.1e-07 | 217-259 |
| HMMSmart | SM00363 | S4 | 0.0041 | 213-270 |
| ProfileScan | PS50889 | S4 | 12.599 | 212-278 |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold | |||
| Gene3D | G3DSA:3.40.50.620 | no description | 3.2e-38 | 1-88 |
| IPR024088 | Tyrosine-tRNA ligase, bacterial-type | |||
| Molecular Function | GO:0004831 | tyrosine-tRNA ligase activity | ||
| HMMPanther | PTHR11766 | TYROSYL-TRNA | 9.5e-116 | 1-279 |
| no_ID | ||||
| Gene3D | G3DSA:1.10.240.10 | no description | 8.5e-35 | 89-173 |
| HMMPanther | PTHR11766:SF0 | SUBFAMILY | 9.5e-116 | 1-279 |
| superfamily | SSF52374 | Nucleotidylyl | 2.6e-52 | 1-179 |
| superfamily | SSF55174 | Alpha-L | 1.7e-18 | 178-279 |
Lj3g3v0461420.1 plas 5, nucl_plas 4.5, chlo 4, nucl 2, cyto 2
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj3g3v0461420.1 | Not targeted | -56.305 | -0.061 | -6.886 | 84.32% | -49.358 |