Miyakogusa Predicted Gene
- Lj3g3v0461410.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JJY4_SOYBN |
285 |
75.0 |
79.7 |
(tr|I1JJY4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G54200.1 |
149 |
50.3 |
74.8 |
| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr3:20065731-20066438 FORWARD LENGTH=235 |
| Medicago |
Medtr8g005060.1 |
275 |
70.8 |
78.6 |
| late embryogenesis abundant protein | HC | chr8:28227-29465 | 20130731 |
| Soybean |
Glyma03g00310.1 |
285 |
75.0 |
79.7 |
|
| LJGI |
gnl|LJGI|TC81453 |
1150 |
100.0 |
100.0 |
similar to UniRef100_Q1STP6 Cluster: Harpin-induced 1; n=1; Medicago truncatula|Rep: Harpin-induced 1 - Medicago truncatula (Barrel medic), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0461410.1 |
length: 192 aa. |
| IPR004864 |
Late embryogenesis abundant protein, LEA-14 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03168 |
LEA_2 |
3e-15 |
71-164 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
13-33 |
| superfamily |
SSF117070 |
LEA14-like |
4.1e-06 |
18-129 |
- Wolf-PSORT
Lj3g3v0461410.1 extr 6, chlo 2, cyto 2, vacu 2, mito 1, E.R. 1, cyto_nucl 1, cyto_pero 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0461410.1 |
|