Miyakogusa Predicted Gene
- Lj3g3v0460920.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
K7MJ31_SOYBN |
709 |
87.1 |
93.0 |
(tr|K7MJ31) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep |
AT5G01930.1 |
560 |
69.3 |
83.1 |
| Symbols: MAN6, AtMAN6 | Glycosyl hydrolase superfamily protein | chr5:361189-362867 REVERSE LENGTH=448 |
Medicago |
Medtr8g005670.1 |
687 |
84.8 |
91.9 |
| mannan endo-1,4-beta-mannosidase-like protein | HC | chr8:280839-282802 | 20130731 |
Soybean |
Glyma03g00440.1 |
670 |
89.0 |
94.9 |
|
LJGI |
gnl|LJGI|TC58756 |
1568 |
100.0 |
100.0 |
similar to UniRef100_A7QFQ7 Cluster: Chromosome chr8 scaffold_88, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_88, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0460920.1 |
length: 384 aa. |
IPR001547 |
Glycoside hydrolase, family 5 |
method |
AccNumber |
shortName |
E-value |
location |
Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
HMMPfam |
PF00150 |
Cellulase |
2.2e-15 |
72-373 |
IPR013781 |
Glycoside hydrolase, catalytic domain |
Molecular Function |
GO:0003824 |
catalytic activity |
|
|
Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
Gene3D |
G3DSA:3.20.20.80 |
no description |
1.9e-115 |
60-382 |
IPR017853 |
Glycoside hydrolase, superfamily |
superfamily |
SSF51445 |
(Trans)glycosidases |
2.6e-72 |
57-382 |
no_ID |
|
HMMPanther |
PTHR31451 |
FAMILY |
1.3e-205 |
55-384 |
- Wolf-PSORT
Lj3g3v0460920.1 chlo 5, vacu 4, nucl 1, cyto 1, extr 1, E.R. 1, pero 1, cyto_nucl 1, cyto_pero 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj3g3v0460920.1 |
|