Miyakogusa Predicted Gene

Lj3g3v0429470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KDS8_SOYBN 234 93.4 96.7 (tr|I1KDS8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G53160.1 137 63.4 75.9 | Symbols: SPL4 | squamosa promoter binding protein-like 4 | chr1:19806478-19807080 FORWARD LENGTH=174
Medicago Medtr8g463140.1 226 66.3 69.5 | squamosa promoter-binding-like protein | HC | chr8:22198280-22196925 | 20130731
Soybean Glyma12g27330.1 230 89.3 94.2  
LJGI gnl|LJGI|TC60868 67.9 92.0 92.0 similar to UniRef100_A7QPU0 Cluster: Chromosome chr10 scaffold_138, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_138, whole genome shotgun sequence - Vitis vinifera (Grape), partial (61%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0429470.1 length: 187 aa.
IPR004333 Transcription factor, SBP-box
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Gene3D G3DSA:4.10.1100.10 no description 2.5e-35 59-128
HMMPfam PF03110 SBP 1.3e-40 67-143
ProfileScan PS51141 ZF_SBP 32.778 64-141
superfamily SSF103612 SBT 1.5e-39 64-149
IPR017238 Squamosa promoter-binding protein
HMMPIR PIRSF037575 Squamosa 1.6e-81 13-187
no_ID  
Coil coil coiled-coil NA 13-35
HMMPanther PTHR31251 FAMILY 3.2e-42 30-149
HMMPanther PTHR31251:SF0 SUBFAMILY 3.2e-42 30-149
Seg seg seg NA 23-42
46-61
Wolf-PSORT
Lj3g3v0429470.1	nucl 10, cyto 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0429470.1