Miyakogusa Predicted Gene
- Lj3g3v0429460.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
Q9ZPL8_LOTJA |
542 |
94.3 |
94.3 |
(tr|Q9ZPL8) Protein phosphatase type 2C OS=Lotus japonicus GN=PP2C2 PE=1 SV=1 |
| TAIR_pep |
AT3G15260.2 |
421 |
70.6 |
82.4 |
| Symbols: | Protein phosphatase 2C family protein | chr3:5138842-5140242 FORWARD LENGTH=289 |
| Medicago |
Medtr8g463130.1 |
464 |
78.7 |
88.7 |
| phosphatase 2C family protein | HC | chr8:22192735-22196250 | 20130731 |
| Soybean |
Glyma06g36150.1 |
464 |
80.5 |
88.3 |
|
| LJGI |
gnl|LJGI|TC58057 |
1689 |
100.0 |
100.0 |
UniRef100_Q9ZPL8 Cluster: Protein phosphatase type 2C; n=1; Lotus japonicus|Rep: Protein phosphatase type 2C - Lotus japonicus, complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0429460.1 |
length: 282 aa. |
| IPR001932 |
Protein phosphatase 2C (PP2C)-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:3.60.40.10 |
no description |
2.8e-80 |
28-282 |
| HMMPfam |
PF00481 |
PP2C |
2.8e-57 |
45-274 |
| HMMSmart |
SM00332 |
Serine/threonine |
2.5e-82 |
24-279 |
| superfamily |
SSF81606 |
PP2C-like |
5.4e-69 |
13-282 |
| IPR015655 |
Protein phosphatase 2C |
| HMMPanther |
PTHR13832 |
PROTEIN |
1.3e-136 |
18-281 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
244-265 |
| HMMPanther |
PTHR13832:SF197PUTATIVE |
UNCHARACTERIZED |
1.3e-136 |
18-281 |
| Seg |
seg |
seg |
NA |
16-31 |
- Wolf-PSORT
Lj3g3v0429460.1 cyto 6, mito 3, pero 3, cyto_E.R. 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0429460.1 |
|