Miyakogusa Predicted Gene

Lj3g3v0429250.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IM52_MEDTR 752 70.8 80.1 (tr|G7IM52) Disease-resistance protein OS=Medicago truncatula GN=MTR_2g083650 PE=4 SV=1
TAIR_pep AT5G17680.1 367 37.5 58.9 | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD LENGTH=1294
Medicago Medtr2g083650.1 752 69.7 79.5 | disease resistance protein (TIR-NBS-LRR class), putative | LC | chr2:35106376-35101094 | 20130731
Soybean Glyma12g34020.1 714 66.2 77.9  
LJGI gnl|LJGI|FS343073 299 82.4 82.4 weakly similar to UniRef100_A7QHI1 Cluster: Chromosome chr5 scaffold_98, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_98, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0429250.1 length: 549 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 4.8e-33 18-150
HMMSmart SM00255 Toll 3.1e-45 15-155
ProfileScan PS50104 TIR 30.569 14-155
superfamily SSF52200 Toll/Interleukin 6.5e-44 4-158
IPR000767 Disease resistance protein
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 2.4e-12 217-232
294-308
396-410
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 1.3e-40 200-463
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.9e-22 174-433
no_ID  
Gene3D G3DSA:3.40.50.10140 no description 1.2e-22 13-147
Gene3D G3DSA:3.40.50.300 no description 5e-07 198-339
HMMPanther PTHR11017 LEUCINE-RICH 5.1e-151 7-539
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 5.1e-151 7-539
Seg seg seg NA 70-79
373-383
superfamily SSF46785 "Winged 7.5e-17 431-537
Wolf-PSORT
Lj3g3v0429250.1	nucl 4, mito 4, chlo 2, plas 2, cyto_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0429250.1