Miyakogusa Predicted Gene

Lj3g3v0429140.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T346_LOTJA 317 89.8 89.8 (tr|I3T346) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G15190.1 175 68.8 80.5 | Symbols: | chloroplast 30S ribosomal protein S20, putative | chr3:5116216-5117412 FORWARD LENGTH=202
Medicago Medtr8g061350.1 218 65.4 74.3 | 30S ribosomal protein S20 | HC | chr8:21120546-21122437 | 20130731
Soybean Glyma06g35690.1 239 70.8 77.0  
LJGI gnl|LJGI|TC58931 1065 100.0 100.0 similar to UniRef100_A7P1S0 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (56%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0429140.1 length: 177 aa.
IPR002583 Ribosomal protein S20
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
BlastProDom PD004231 RS20_SYNY3_P73336; 2e-09 82-157
Gene3D G3DSA:1.20.58.110 no description 4.9e-33 71-172
HAMAP MF_00500 Ribosomal_S20 14.640 66-161
HMMPfam PF01649 Ribosomal_S20p 1.4e-19 71-158
HMMTigr TIGR00029 S20: 1.4e-15 70-157
superfamily SSF46992 Ribosomal 3.9e-22 70-177
no_ID  
Coil coil coiled-coil NA 92-113
Seg seg seg NA 18-35
Wolf-PSORT
Lj3g3v0429140.1	chlo 12, mito 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0429140.1