Miyakogusa Predicted Gene

Lj3g3v0428950.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M344_SOYBN 2131 60.9 71.2 (tr|I1M344) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G15120.1 1410 48.9 63.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:5088487-5095482 REVERSE LENGTH=1954
Medicago Medtr2g078630.1 2058 58.4 68.7 | P-loop nucleoside triphosphate hydrolase superfamily protein, putative | HC | chr2:32829577-32820356 | 20130731
Soybean Glyma13g34850.1 2017 58.9 69.0  
LJGI gnl|LJGI|AV780451 634 95.3 95.3 weakly similar to UniRef100_A7P1T3 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0428950.1 length: 1845 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 3.5e-18 621-762
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 7.7e-37 625-760
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 730-748
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 0.0054 585-815
887-1086
no_ID  
Gene3D G3DSA:1.10.8.60 no description 6e-14 769-853
Gene3D G3DSA:3.40.50.300 no description 9.5e-52 586-768
HMMPanther PTHR23069 TAT-BINDING 4e-183 586-1199
HMMPanther PTHR23069:SF0 SUBFAMILY 4e-183 586-1199
HMMPfam PF13771 zf-HC5HC2H 3e-14 421-500
Seg seg seg NA 44-61
69-79
130-143
146-169
513-527
880-897
Wolf-PSORT
Lj3g3v0428950.1	nucl 10, vacu 2, chlo 1, cyto 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0428950.1