Miyakogusa Predicted Gene

Lj3g3v0428880.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7LDQ2_MEDTR 576 76.7 82.5 (tr|G7LDQ2) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_8g061040 PE=3 SV=1
TAIR_pep AT3G18380.1 384 57.8 72.1 | Symbols: | sequence-specific DNA binding transcription factors;sequence-specific DNA binding | chr3:6311002-6313181 REVERSE LENGTH=348
Medicago Medtr8g061040.1 576 76.7 82.5 | sequence-specific DNA-binding transcription factor | HC | chr8:21158982-21150809 | 20130731
Soybean Glyma12g18490.1 535 70.2 77.0  
LJGI gnl|LJGI|TC65004 2236 100.0 100.0 similar to UniRef100_Q3E7G2 Cluster: Uncharacterized protein At3g18380.2; n=1; Arabidopsis thaliana|Rep: Uncharacterized protein At3g18380.2 - Arabidopsis thaliana (Mouse-ear cress), partial (68%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0428880.1 length: 374 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 0.00017 13-74
HMMSmart SM00389 Homeodomain 0.0012 7-81
ProfileScan PS50071 HOMEOBOX_2 9.475 13-77
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 1e-06 13-81
superfamily SSF46689 Homeodomain-like 9.4e-11 8-86
no_ID  
Coil coil coiled-coil NA 12-33
HMMPanther PTHR31979 FAMILY 7.3e-106 2-269
Seg seg seg NA 224-235
Wolf-PSORT
Lj3g3v0428880.1	chlo 6, nucl 6, mito 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0428880.1