Miyakogusa Predicted Gene
- Lj3g3v0428820.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LSW3_SOYBN |
518 |
92.1 |
95.5 |
(tr|I1LSW3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G54080.2 |
468 |
85.5 |
91.0 |
| Symbols: HGO | homogentisate 1,2-dioxygenase | chr5:21945920-21948070 FORWARD LENGTH=461 |
| Medicago |
Medtr8g463280.1 |
506 |
91.1 |
96.5 |
| homogentisate 1,2-dioxygenase | HC | chr8:22275980-22281458 | 20130731 |
| Soybean |
Glyma12g20220.1 |
518 |
92.1 |
95.5 |
|
| LJGI |
gnl|LJGI|TC62630 |
1659 |
100.0 |
100.0 |
similar to UniRef100_A7P1V8 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (92%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0428820.1 |
length: 278 aa. |
| IPR005708 |
Homogentisate 1,2-dioxygenase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004411 |
homogentisate 1,2-dioxygenase activity |
|
|
| Biological Process |
GO:0006559 |
L-phenylalanine catabolic process |
|
|
| Biological Process |
GO:0006570 |
tyrosine metabolic process |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPanther |
PTHR11056 |
HOMOGENTISATE |
8.7e-159 |
1-270 |
| HMMPfam |
PF04209 |
HgmA |
3.2e-118 |
2-254 |
| IPR011051 |
RmlC-like cupin domain |
| superfamily |
SSF51182 |
RmlC-like |
6.7e-98 |
1-260 |
| IPR014710 |
RmlC-like jelly roll fold |
| Gene3D |
G3DSA:2.60.120.10 |
no description |
3.3e-68 |
104-224 |
| no_ID |
|
| HMMPanther |
PTHR11056:SF0 |
HOMOGENTISATE |
8.7e-159 |
1-270 |
- Wolf-PSORT
Lj3g3v0428820.1 cyto 7, mito 2, pero 2, nucl 1, plas 1, extr 1, chlo_mito 1, cyto_mito 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0428820.1 |
|