Miyakogusa Predicted Gene

Lj3g3v0428800.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K4N4_MEDTR 413 69.3 73.6 (tr|G7K4N4) Pre-mRNA-splicing factor ISY1-like protein OS=Medicago truncatula GN=MTR_5g095510 PE=4 SV=1
TAIR_pep AT3G18790.1 365 62.7 70.0 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isy1-like splicing (InterPro:IPR009360); Has 1147 Blast hits to 965 proteins in 236 species: Archae - 12; Bacteria - 13; Metazoa - 351; Fungi - 230; Plants - 49; Viruses - 9; Other Eukaryotes - 483 (source: NCBI BLink). | chr3:6477853-6478755 FORWARD LENGTH=300
Medicago Medtr5g095510.1 413 69.3 73.6 | Pre-mRNA-splicing factor ISY1 | HC | chr5:41743574-41745099 | 20130731
Soybean Glyma09g18830.1 197 53.8 60.9  
LJGI gnl|LJGI|TC71988 1134 99.5 99.5 similar to UniRef100_Q6K5F4 Cluster: 2 coiled coil domains of eukaryotic origin (31.3 kD)-like protein; n=2; Oryza sativa|Rep: 2 coiled coil domains of eukaryotic origin (31.3 kD)-like protein - Oryza sativa subsp. japonica (Rice), partial (59%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0428800.1 length: 303 aa.
IPR009360 Isy1-like splicing
method AccNumber shortName E-value location
HMMPanther PTHR13021 FAMILY 4.8e-175 2-301
HMMPfam PF06246 Isy1 1.7e-89 1-283
no_ID  
Coil coil coiled-coil NA 71-92
234-255
Seg seg seg NA 21-31
184-195
223-254
264-280
superfamily SSF140102 ISY1 1.2e-32 24-103
Wolf-PSORT
Lj3g3v0428800.1	nucl 9, cyto 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0428800.1