Miyakogusa Predicted Gene

Lj3g3v0428780.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M332_SOYBN 431 93.1 98.6 (tr|I1M332) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G22140.2 391 81.7 89.7 | Symbols: EBS | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein | chr4:11728093-11730230 REVERSE LENGTH=224
Medicago Medtr2g078310.1 404 93.1 96.8 | PHD finger and bromo-adjacent-like domain protein | HC | chr2:32595275-32591772 | 20130731
Soybean Glyma13g34740.2 431 93.1 98.6  
LJGI gnl|LJGI|TC65266 1291 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0428780.1 length: 216 aa.
IPR001025 Bromo adjacent homology (BAH) domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
HMMPfam PF01426 BAH 9.5e-25 23-135
HMMSmart SM00439 Bromo 7.8e-40 21-136
ProfileScan PS51038 BAH 23.667 21-136
IPR001965 Zinc finger, PHD-type
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 3e-10 140-187
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 1.1e-16 127-197
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 5.1e-17 137-193
IPR019786 Zinc finger, PHD-type, conserved site
PatternScan PS01359 ZF_PHD_1 NA 141-186
IPR019787 Zinc finger, PHD-finger
Molecular Function GO:0005515 protein binding    
HMMPfam PF00628 PHD 8.6e-11 140-188
ProfileScan PS50016 ZF_PHD_2 9.196 138-189
no_ID  
HMMPanther PTHR12505 PHD 5e-118 1-165
HMMPanther PTHR12505:SF7 TNC18_HUMAN 5e-118 1-165
Wolf-PSORT
Lj3g3v0428780.1	cyto 10, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0428780.1