Miyakogusa Predicted Gene

Lj3g3v0428490.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7LUT9_SOYBN 441 55.3 65.5 (tr|K7LUT9) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT1G53250.1 159 58.2 74.6 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53800.1); Has 11909 Blast hits to 7704 proteins in 757 species: Archae - 51; Bacteria - 1338; Metazoa - 4550; Fungi - 987; Plants - 464; Viruses - 24; Other Eukaryotes - 4495 (source: NCBI BLink). | chr1:19857468-19859156 FORWARD LENGTH=371

Medicago Medtr8g464010.1 390 49.4 60.6 | hypothetical protein | HC | chr8:22600722-22596106 | 20130731

Soybean Glyma12g18970.1 343 57.3 66.1

LJGI gnl|LJGI|FS342879 182 95.5 95.5 homologue to UniRef100_P52389 Cluster: Cell division control protein 2 homolog; n=1; Vigna unguiculata|Rep: Cell division control protein 2 homolog - Vigna unguiculata (Cowpea), partial (20%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v0428490.1 length: 437 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 234-255
300-321

Seg seg seg NA 232-251
269-281
301-328

Wolf-PSORT

Lj3g3v0428490.1 chlo 12, nucl 1, pero 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v0428490.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7LUT9_SOYBN	441	55.3	65.5	(tr\|K7LUT9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT1G53250.1	159	58.2	74.6	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53800.1); Has 11909 Blast hits to 7704 proteins in 757 species: Archae - 51; Bacteria - 1338; Metazoa - 4550; Fungi - 987; Plants - 464; Viruses - 24; Other Eukaryotes - 4495 (source: NCBI BLink). \| chr1:19857468-19859156 FORWARD LENGTH=371
Medicago	Medtr8g464010.1	390	49.4	60.6	\| hypothetical protein \| HC \| chr8:22600722-22596106 \| 20130731
Soybean	Glyma12g18970.1	343	57.3	66.1
LJGI	gnl\|LJGI\|FS342879	182	95.5	95.5	homologue to UniRef100_P52389 Cluster: Cell division control protein 2 homolog; n=1; Vigna unguiculata\|Rep: Cell division control protein 2 homolog - Vigna unguiculata (Cowpea), partial (20%)

no_ID
Lj3g3v0428490.1				length: 437 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	234-255 300-321
Seg	seg	seg	NA	232-251 269-281 301-328