Miyakogusa Predicted Gene

Lj3g3v0426270.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KDK2_SOYBN 583 65.2 76.4 (tr|I1KDK2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G53330.1 443 49.1 68.2 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:19896027-19897442 FORWARD LENGTH=471
Medicago Medtr8g058400.1 380 69.6 82.5 | PPR containing plant-like protein | HC | chr8:20112988-20113965 | 20130731
Soybean Glyma06g32720.2 583 65.2 76.4  
LJGI gnl|LJGI|FS340646 1445 100.0 100.0 similar to UniRef100_A7P216 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0426270.1 length: 458 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00026 223-252
HMMPfam PF13041 PPR_2 6.6e-20 148-197
257-303
322-371
HMMTigr TIGR00756 PPR: 8.1e-08 151-184
187-214
223-256
258-290
292-315
327-359
360-392
ProfileScan PS51375 PPR 5.229 44-74
149-183
115-145
184-214
220-254
255-289
323-357
290-320
358-392
428-458
393-427
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00034 257-347
no_ID  
HMMPanther PTHR24015 FAMILY 8.2e-101 6-453
HMMPanther PTHR24015:SF0 SUBFAMILY 8.2e-101 6-453
superfamily SSF48452 TPR-like 1.4e-06 218-337
Wolf-PSORT
Lj3g3v0426270.1	chlo 11, mito 2.5, cyto_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0426270.1