Miyakogusa Predicted Gene
- Lj3g3v0424200.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IE34_MEDTR |
204 |
66.9 |
74.5 |
(tr|G7IE34) Blue copper protein OS=Medicago truncatula GN=MTR_1g105120 PE=4 SV=1 |
| TAIR_pep |
AT3G17675.1 |
97.1 |
45.1 |
59.8 |
| Symbols: | Cupredoxin superfamily protein | chr3:6042244-6042781 REVERSE LENGTH=106 |
| Medicago |
Medtr1g105120.1 |
204 |
66.9 |
74.5 |
| plastocyanin-like domain protein | HC | chr1:24990496-24991335 | 20130731 |
| Soybean |
Glyma16g04260.1 |
159 |
63.4 |
77.7 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0424200.1 |
length: 145 aa. |
| IPR003245 |
Plastocyanin-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005507 |
copper ion binding |
|
|
| Molecular Function |
GO:0009055 |
electron carrier activity |
|
|
| BlastProDom |
PD003122 |
Q852J1_ORYSA_Q852J1; |
7e-10 |
45-111 |
| HMMPfam |
PF02298 |
Cu_bind_like |
1.2e-25 |
23-101 |
| ProfileScan |
PS51485 |
PHYTOCYANIN |
36.602 |
13-113 |
| IPR008972 |
Cupredoxin |
| Gene3D |
G3DSA:2.60.40.420 |
no description |
7.3e-33 |
10-114 |
| superfamily |
SSF49503 |
Cupredoxins |
1.3e-30 |
11-113 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
113-129 |
- Wolf-PSORT
Lj3g3v0424200.1 cyto 6, extr 6, E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0424200.1 |
|