Miyakogusa Predicted Gene

Lj3g3v0421670.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MKV9_SOYBN 1417 77.3 85.2 (tr|I1MKV9) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G40720.1 415 32.0 52.7 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:16987269-16989851 FORWARD LENGTH=860
Medicago Medtr7g053240.1 436 31.3 52.0 | pentatricopeptide (PPR) repeat protein | HC | chr7:18723182-18719939 | 20130731
Soybean Glyma16g03990.1 1372 80.7 89.1  
LJGI gnl|LJGI|TC66351 54.0 94.3 94.3 similar to UniRef100_A7Q618 Cluster: Chromosome chr14 scaffold_54, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_54, whole genome shotgun sequence - Vitis vinifera (Grape), partial (53%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0421670.1 length: 914 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0084 123-153
300-324
503-528
531-556
632-657
HMMPfam PF13041 PPR_2 2.8e-08 227-270
732-779
HMMTigr TIGR00756 PPR: 0.0017 123-157
531-557
734-767
769-797
ProfileScan PS51375 PPR 6.149 121-155
90-120
224-258
259-293
294-328
426-460
395-425
529-563
498-528
461-495
630-660
732-766
701-731
767-797
803-837
no_ID  
HMMPanther PTHR24015 FAMILY 5.4e-179 75-912
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 5.4e-179 75-912
Wolf-PSORT
Lj3g3v0421670.1	chlo 10, mito 2.5, cyto_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0421670.1