Miyakogusa Predicted Gene

Lj3g3v0409470.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SRJ2_LOTJA 527 90.9 90.9 (tr|I3SRJ2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G14450.1 355 62.6 74.4 | Symbols: CID9 | CTC-interacting domain 9 | chr3:4849788-4851601 FORWARD LENGTH=327
Medicago Medtr2g070540.1 427 76.4 83.1 | CTC-interacting domain protein | HC | chr2:29723724-29729859 | 20130731
Soybean Glyma15g40060.1 435 75.7 83.5  
LJGI gnl|LJGI|TC61397 1538 97.0 97.0 similar to UniRef100_A7QK80 Cluster: Chromosome chr19 scaffold_111, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_111, whole genome shotgun sequence - Vitis vinifera (Grape), partial (73%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0409470.2 length: 303 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMSmart SM00360 RNA 8.3e-11 128-198
225-296
ProfileScan PS50102 RRM 11.963 127-202
224-300
IPR009818 Ataxin-2, C-terminal
HMMPfam PF07145 PAM2 0.00025 42-57
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 1.6e-13 118-182
183-299
no_ID  
HMMPanther PTHR24011 FAMILY 2.8e-136 34-303
HMMPanther PTHR24011:SF12 SUBFAMILY 2.8e-136 34-303
HMMPfam PF14259 RRM_6 3.2e-08 129-195
226-294
Seg seg seg NA 2-18
81-85
95-115
superfamily SSF54928 RNA-binding 1.8e-14 90-208
209-301
Wolf-PSORT
Lj3g3v0409470.2	E.R. 4.5, cyto 3, mito 3, E.R._plas 3, nucl 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0409470.2