Miyakogusa Predicted Gene

Lj3g3v0381680.5
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K197_SOYBN 650 53.1 63.3 (tr|K7K197) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G63130.1 206 28.3 48.4 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:23412854-23414746 FORWARD LENGTH=630
Medicago Medtr5g029690.1 395 40.4 57.2 | PPR containing plant-like protein | HC | chr5:12486752-12480740 | 20130731
Soybean Glyma01g02030.1 650 53.1 63.3  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0381680.5 length: 645 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.45 139-162
384-413
490-517
HMMPfam PF12854 PPR_1 9.4e-06 233-263
519-550
HMMPfam PF13041 PPR_2 3.2e-16 272-320
418-464
556-601
HMMTigr TIGR00756 PPR: 1.3e-09 275-308
309-342
384-416
490-523
524-557
559-593
ProfileScan PS51375 PPR 9.186 136-170
171-205
272-306
237-271
307-341
381-415
342-380
416-450
451-486
487-521
522-556
557-591
592-626
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.001 265-411
no_ID  
HMMPanther PTHR24015 FAMILY 1.3e-116 9-630
HMMPanther PTHR24015:SF0 SUBFAMILY 1.3e-116 9-630
Seg seg seg NA 12-23
183-197
325-336
Wolf-PSORT
Lj3g3v0381680.5	cyto 5, chlo 3.5, nucl 3, chlo_mito 3, mito 1.5, cysk_nucl 1.5, nucl_plas 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0381680.5