Miyakogusa Predicted Gene

Lj3g3v0381620.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K197_SOYBN 551 47.8 57.5 (tr|K7K197) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G39710.1 198 26.9 44.8 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15895729-15897972 FORWARD LENGTH=747
Medicago Medtr5g029690.1 360 39.9 55.3 | PPR containing plant-like protein | HC | chr5:12486752-12480740 | 20130731
Soybean Glyma01g02030.1 551 47.8 57.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0381620.1 length: 621 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.01 176-199
421-450
HMMPfam PF12854 PPR_1 1.7e-06 270-300
HMMPfam PF13041 PPR_2 2.7e-13 309-357
454-501
541-580
HMMTigr TIGR00756 PPR: 1.2e-09 312-345
346-379
421-453
537-571
ProfileScan PS51375 PPR 9.186 173-207
208-242
309-343
274-308
344-378
418-452
379-417
453-487
488-520
535-569
570-604
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.001 302-448
no_ID  
HMMPanther PTHR24015 FAMILY 3.1e-100 11-606
HMMPanther PTHR24015:SF0 SUBFAMILY 3.1e-100 11-606
Seg seg seg NA 49-60
220-234
362-373
Wolf-PSORT
Lj3g3v0381620.1	chlo 11, chlo_mito 7.83333, mito 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0381620.1