Miyakogusa Predicted Gene
- Lj3g3v0371550.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7M989_SOYBN |
553 |
84.7 |
92.9 |
(tr|K7M989) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G06050.1 |
409 |
65.6 |
79.3 |
| Symbols: | Protein of unknown function (DUF1336) | chr1:1830726-1831667 REVERSE LENGTH=313 |
| Medicago |
Medtr4g067360.1 |
479 |
75.9 |
85.8 |
| lipid-binding protein | HC | chr4:25435449-25432851 | 20130731 |
| Soybean |
Glyma15g03380.2 |
551 |
84.7 |
92.9 |
|
| LJGI |
gnl|LJGI|TC80119 |
1239 |
99.7 |
99.7 |
similar to UniRef100_A7QM98 Cluster: Chromosome chr5 scaffold_124, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_124, whole genome shotgun sequence - Vitis vinifera (Grape), partial (65%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0371550.1 |
length: 308 aa. |
| IPR009769 |
Domain of unknown function DUF1336 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF07059 |
DUF1336 |
1.6e-71 |
34-246 |
| no_ID |
|
| HMMPanther |
PTHR31085 |
FAMILY |
7.5e-104 |
11-280 |
| HMMPanther |
PTHR31085:SF0 |
SUBFAMILY |
7.5e-104 |
11-280 |
- Wolf-PSORT
Lj3g3v0371550.1 cyto 8, nucl 2, chlo 1, mito 1, extr 1, golg 1, chlo_mito 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0371550.1 |
|