Miyakogusa Predicted Gene

Lj3g3v0349300.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7M3K5_SOYBN 403 76.7 82.2 (tr|K7M3K5) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G67550.1 145 29.5 51.0 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits to 154 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:26946908-26949112 REVERSE LENGTH=509

Medicago Medtr2g099140.2 387 74.1 79.6 | transmembrane protein, putative | HC | chr2:42512581-42508885 | 20130731

Soybean Glyma13g42120.1 403 76.9 82.4

LJGI gnl|LJGI|FS354918 783 99.5 99.5 weakly similar to UniRef100_A7QAM1 Cluster: Chromosome chr5 scaffold_72, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_72, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v0349300.1 length: 249 aa.

no_ID

method AccNumber shortName E-value location

HMMPanther PTHR31414 FAMILY 1.6e-16 1-246

Seg seg seg NA 205-217

Wolf-PSORT

Lj3g3v0349300.1 plas 8, extr 2, vacu 2, cyto 1, golg 1, E.R._vacu 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v0349300.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7M3K5_SOYBN	403	76.7	82.2	(tr\|K7M3K5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G67550.1	145	29.5	51.0	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits to 154 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr5:26946908-26949112 REVERSE LENGTH=509
Medicago	Medtr2g099140.2	387	74.1	79.6	\| transmembrane protein, putative \| HC \| chr2:42512581-42508885 \| 20130731
Soybean	Glyma13g42120.1	403	76.9	82.4
LJGI	gnl\|LJGI\|FS354918	783	99.5	99.5	weakly similar to UniRef100_A7QAM1 Cluster: Chromosome chr5 scaffold_72, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr5 scaffold_72, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%)

no_ID
Lj3g3v0349300.1				length: 249 aa.
method	AccNumber	shortName	E-value	location
HMMPanther	PTHR31414	FAMILY	1.6e-16	1-246
Seg	seg	seg	NA	205-217