Miyakogusa Predicted Gene

Lj3g3v0339040.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T5T6_LOTJA 849 95.4 95.4 (tr|I3T5T6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G30710.1 653 72.9 83.5 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr2:13086147-13088991 REVERSE LENGTH=440
Medicago Medtr2g099380.1 776 85.7 91.7 | RabGAP/TBC domain protein | HC | chr2:42598039-42603808 | 20130731
Soybean Glyma15g03200.1 756 83.4 90.1  
LJGI gnl|LJGI|TC59556 1358 98.9 98.9 similar to UniRef100_A7QAM9 Cluster: Chromosome chr5 scaffold_72, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_72, whole genome shotgun sequence - Vitis vinifera (Grape), partial (48%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0339040.1 length: 445 aa.
IPR000195 Rab-GTPase-TBC domain
method AccNumber shortName E-value location
Molecular Function GO:0005097 Rab GTPase activator activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0032313 regulation of Rab GTPase activity    
HMMPfam PF00566 RabGAP-TBC 2.2e-53 153-395
HMMSmart SM00164 Domain 3.8e-55 145-401
ProfileScan PS50086 TBC_RABGAP 33.853 148-375
superfamily SSF47923 Ypt/Rab-GAP 1.1e-37 117-335
310-437
no_ID  
Gene3D G3DSA:1.10.8.270 no description 4.2e-24 140-300
HMMPanther PTHR22957 TBC1 2e-176 44-443
HMMPanther PTHR22957:SF26 TBC1 2e-176 44-443
Seg seg seg NA 3-13
76-87
224-229
Wolf-PSORT
Lj3g3v0339040.1	nucl 9, cyto 3, cysk 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0339040.1