Miyakogusa Predicted Gene

Lj3g3v0338970.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IS22_MEDTR 313 54.8 62.1 (tr|G7IS22) Nuclear transcription factor Y subunit A-3 OS=Medicago truncatula GN=MTR_2g099490 PE=4 SV=1
TAIR_pep AT1G17590.4 146 52.8 63.8 | Symbols: NF-YA8 | nuclear factor Y, subunit A8 | chr1:6050481-6051984 REVERSE LENGTH=328
Medicago Medtr2g099490.2 313 54.8 62.1 | CCAAT-binding transcription factor | HC | chr2:42652791-42657108 | 20130731
Soybean Glyma07g04050.4 305 52.7 63.0  
LJGI gnl|LJGI|BP063680 442 99.1 99.1  
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0338970.3 length: 314 aa.
IPR001289 CCAAT-binding transcription factor, subunit B
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00616 CCAATSUBUNTB 3.7e-23 181-203
212-235
HMMPanther PTHR12632 TRANSCRIPTION 1.4e-53 64-250
HMMPfam PF02045 CBFB_NFYA 1.1e-28 179-235
HMMSmart SM00521 CCAAT-Binding 3.3e-36 177-238
ProfileScan PS51152 NFYA_HAP2_2 36.233 178-238
IPR018362 CCAAT-binding factor, conserved site
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0016602 CCAAT-binding factor complex    
PatternScan PS00686 NFYA_HAP2_1 NA 183-203
no_ID  
Seg seg seg NA 30-43
62-79
Wolf-PSORT
Lj3g3v0338970.3	nucl 10, extr 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0338970.3